MAJIQ: Modeling Alternative Junction Inclusion and Quantification

MAJIQ uses the results of RNA-seq experiments to analyze alternative splicing.

For users

• Getting started
• Gallery
  • Using MAJIQ HET (ENCODE RBP knockdowns)
• Whats new
  • 2.3.0
• Modulizer
  • Quick Start
  • How VOILA categorizer works
  • Output
  • Splicegraph Modules
  • Event Types Identified
  • Additional Arguments/Modes
  • Examples
  • Output Files
• Majiq-L (long reads)
  • VOILA lr: Unified Visualization
  • VOILA lr
  • Citation
• Command Builder tool

Indices and tables

• Index

• Module Index

• Search Page