rna\_majiq.SJJunctionsBins
==========================

.. currentmodule:: rna_majiq

.. autoclass:: SJJunctionsBins

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~SJJunctionsBins.__init__
      ~SJJunctionsBins.flip_strand
      ~SJJunctionsBins.from_arrays
      ~SJJunctionsBins.from_bam
      ~SJJunctionsBins.from_zarr
      ~SJJunctionsBins.numbins
      ~SJJunctionsBins.numreads
      ~SJJunctionsBins.numstacks
      ~SJJunctionsBins.prefix_from_zarr
      ~SJJunctionsBins.project_reads
      ~SJJunctionsBins.rename_prefix
      ~SJJunctionsBins.to_unstranded
      ~SJJunctionsBins.to_zarr
      ~SJJunctionsBins.with_summaries
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~SJJunctionsBins.IDX_NAME
      ~SJJunctionsBins.bin_idx
      ~SJJunctionsBins.bin_reads
      ~SJJunctionsBins.bin_reads_2d
      ~SJJunctionsBins.df
      ~SJJunctionsBins.original_path
      ~SJJunctionsBins.original_time
      ~SJJunctionsBins.original_version
      ~SJJunctionsBins.prefix
      ~SJJunctionsBins.regions
      ~SJJunctionsBins.sjb_idx
      ~SJJunctionsBins.sjb_idx_end
      ~SJJunctionsBins.sjb_idx_start
      ~SJJunctionsBins.strandness
      ~SJJunctionsBins.total_bins