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2.42.dev285+gcfe719c7.d20231011

For users

  • Getting started
  • Gallery
  • Whats new
  • Modulizer
    • Quick Start
    • How VOILA categorizer works
    • Output
    • Splicegraph Modules
    • Event Types Identified
    • Additional Arguments/Modes
    • Examples
    • Output Files
  • Command Builder tool
MAJIQ
  • Modulizer Index
  • View page source

Modulizer Index¶

  • Quick Start
  • How VOILA categorizer works
    • Decomplexify
    • Identify Modules
    • Categorize Events within Modules
  • Output
  • Splicegraph Modules
  • Event Types Identified
    • Cassette Exons
    • Tandem Cassette
    • Alternative Splice Sites - 5’, 3’, or both - (Alt 5/3)
    • Putative Alternative Splice Sites (P_Alt 5/3)
    • Mutually Exclusive Exons (MXE)
    • Alternative First/Last Exons (AFE/ALE)
    • Putative Alternative First/Last Exons (P_AFE/ALE)
    • Alternative Intron
    • Orphan Junction
    • Exitron
    • Constitutive Junction or Persistent Intron
    • Multi Exon Spanning
    • Other
    • Putative Multi-Gene Regions
  • Additional Arguments/Modes
    • Decomplexify stage arguments
    • Definitions for changing and non-changing
    • Other Arguments
  • Examples
    • Six module example
  • Output Files
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