new_majiq.PsiCoverage.to_zarr

PsiCoverage.to_zarr(path, consolidated=True, show_progress=False, ec_idx_chunks=None, prefix_chunks=None)

Save PsiCoverage to specified path

Parameters:
  • path (Union[str, Path]) – Path for output file in zarr format

  • consolidated (bool) – When saving the file make sure that it is consolidated. In general, if you are appending a bunch of files together, it can make sense to set consolidated=False, and consolidate on the last write (only consolidate once). But, don’t forget to consolidate at the end.

  • show_progress (bool) – Attempt to show progress on distributed cluster for Dask

  • ec_idx_chunks (int) – manual size of ec_idx_chunks

  • prefix_chunks (int) – manual size of prefix_chunks