rna_majiq.GeneIntrons.update_flags_from

GeneIntrons.update_flags_from(donor_introns)

Update flags using overlapping donor GeneIntrons

Update flags (denovo, passed_build, simplified) using overlapping donor GeneIntrons in place.

Parameters:

donor_introns (GeneIntrons) – Flags from donor_introns will be used to update flags in self when they overlap (if annotated in donor, mark as annotated, if passed in donor, mark as passed, if unsimplified in donor, mark as unsimplified)

Returns:

GeneIntrons – Returns self, after flags have been updated