new_majiq.Exons.potential_introns

Exons.potential_introns(make_simplified=False)

GeneIntrons enumerating all possible introns between exons

Return GeneIntrons enumerating all possible introns between exons. All introns will be initially marked as de novo and not passing filters (use GeneIntrons.update_flags_from() to update these flags)

Parameters:

make_simplified (bool) – Indicate whether introns should start in the simplified state (requires subsequently performing simplification with SimplifierGroup to identify which introns pass simplification thresholds)