new_majiq.PassedJunctionsGenerator

class rna_majiq.PassedJunctionsGenerator(junctions)

Accumulator of GroupJunctionsGenerator to create updated GeneJunctions

__init__(junctions)

Methods

__init__(junctions)

add_group(group[, min_experiments])

Update passed junctions with GroupJunctionsGenerator build group

add_junction(gene_idx, start, end)

Pass the specified junction

get_passed([denovo_simplified])

Return GeneJunctions with updated flags and novel junctions

Attributes

num_denovo

Number of denovo junctions passing filters (excluding known denovos)

num_known

Number of 'known' junctions (originally passed in)